Alireza PoshtkohiInterdisciplinary research
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Scientific software

Research you can
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Scientific computing environments and model implementations that connect mathematical ideas with practical investigation.

01 / Computational physiology

GTG Cell Studio

Windows research preview

Model editing, experimental-data inspection, simulation, fitting and scientific figures in one native application. The computational realisation of the General Theory of Gating.

Evaluation access

The public repository distributes the compiled application. An installation key is required; contact me using the address in the release instructions.

What is public

Release information and application downloads. The GTG implementation source and complete theory/language manuals are not published in this repository.

Project websiteView downloadsExplore the theory
Windows x64Model editing · simulation · fittingAssociated papers in preparation
02 / Computational mathematics

Pentarnion Studio

Open-source research preview

A scientific programming environment combining a MATLAB-style command window, script editor, native numerical modules and dockable figures for algebra and numerical experiments.

Supported contexts include Pentarnions alongside real, complex, quaternion and other documented algebras. Operand order and parentheses are preserved in nonassociative multiplication. Consult the specifications for the exact operations and numerical limits.

Project websiteSource & documentationSoftware releases
First-party source: Apache 2.0Windows / Linux build documentationSoftware archive DOI
Models & infrastructure

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03

gHH receptor models

Model code, parameters and supporting materials for the published generalised Hodgkin–Huxley receptor framework.

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04

Computational neuroscience

Code associated with microglial electrophysiology, calcium dynamics and intracellular-signalling research.

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05

PSML

Parallel System Modeling and Simulation Language for electronic system-level research.

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06

PADS / Parvicursor

Distributed and high-performance infrastructure, with companion material for the CRC Press book.

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07

Parallel simulation

A parallel simulation engine and related computing research.

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Versions and reproducibility

Use the release notes for current platform support, checksums and access requirements. Cite the relevant scientific paper and exact software version when reproducing a result; a general software download is not a substitute for the accompanying mathematical or physiological evidence.

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